PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g314520.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 160aa    MW: 18117.6 Da    PI: 7.0284
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g314520.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.38.6e-093272348
                      -HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48
                      +W++Ia++++ gRt++++k++w+++l
  Pd.00g314520.m01  3 RWSAIASKLP-GRTDNEIKNFWHSHL 27
                      4*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    
MYRWSAIASK LPGRTDNEIK NFWHSHLKKR VEEERQVPAA APLTRSINNI TLLKNGDQRI  60
QCPIQYAPTT FFRLDDDDDL HNKLLSKTTC SSPNIINADP GLEPPFSSSS SNSTAVQIMK  120
REGSKIHEDM DFWYSLFMKA GEPSTVALPV CHCMMEFSAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.24e-14MYB_related family protein