PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g314440.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 255aa    MW: 29061.7 Da    PI: 4.6449
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g314440.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.15.9e-20120169355
               AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       y+GVr+++ +g+++AeIrd + ng   r++lg+f+taeeAa a+++a+ +++g
  Pd.00g314440.m01 120 YRGVRRRP-WGKFAAEIRDSTRNG--VRVWLGTFDTAEEAALAYDQAAFAMRG 169
                       9*******.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MDSSFFQNPI SEFSFDSSSS FNSSEFSFDQ YYSSDHRHHL SWSWDMFNFV DHHHHSQPFP  60
QLPFNENDSE EMLLYGVLAE APAGGDHNNS SESITHSNKD IHEEVNSSNS TPEEDQAISY  120
RGVRRRPWGK FAAEIRDSTR NGVRVWLGTF DTAEEAALAY DQAAFAMRGS LAVLNFPADV  180
VYQSLVEMKY GFEEGSSPVL ALKRRHSLKR KSSMNKKKKL SDHQKNDEND DEDQLVLEDL  240
GADYLEELLT ISAMT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1203219KRRHSLKRKSSMNKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.16e-48ERF family protein