PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g314110.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 354aa MW: 39921.7 Da PI: 10.1893 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 100.1 | 1.4e-31 | 292 | 350 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D+y+WrKYGqK++kgs++pr+YY+C+s gCp++k+vers edp ++++tYegeH+h+ Pd.00g314110.m01 292 ADEYSWRKYGQKPIKGSPYPRGYYKCSSMrGCPARKHVERSLEDPAMLVVTYEGEHKHS 350 69************************9988****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 354 aa Download sequence |
MDEVEEANKA AVESCHGVLS HLCQSKGQVH CKNLLAETEE AVFKFKRVVS LLGGGLGHGR 60 VRKLKKFKPP PLPQNIFLDG PNYRLDISTK SLQLLPPTSL ENRRAEKDSK YGSSLQHTHS 120 QKVFLGNPVV DLDMKIKLPL QIPKTKPLQQ YHFLEQKHEH QQEIQRLQLQ PQQLKYQADT 180 MYSGRNRGIN LAFDRSTTRT PSMSSARSFV SCLSMDGGVA NTHCDSFQLI RGVPQPPDRI 240 SQQQRRCNGA GENGTVKCGS SGKCQYPKKR KVRVKRSFKV PAISNKIADI PADEYSWRKY 300 GQKPIKGSPY PRGYYKCSSM RGCPARKHVE RSLEDPAMLV VTYEGEHKHS PSDQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28650.1 | 2e-69 | WRKY family protein |