PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g313930.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 335aa    MW: 35566 Da    PI: 6.044
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g313930.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.33.7e-10184228554
                       HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       h+++Er RR+ri +++  L+el+P++      K + a++L + v+Y+k L
  Pd.00g313930.m01 184 HSIAERLRRERIAERMKALQELVPSC-----NKTDRAAMLDEIVDYVKFL 228
                       99***********************8.....6****************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MAGNPPEGLG DDFFEQILAV PPSYSTGGAD SAGGGYGDVG SMPMVLQLGS GGSSSAGGGG  60
GYRGVGMGMG MPLGLNLEQG GFIGPERFRE LREEVEANTN NNINTSNVSA SVSSAMNERD  120
SVHMTNLFPA FGHLQNHSLR PTPPPPQPHQ FHSQPSPGPV AAVHHPPAIR PRVRARRGQA  180
TDPHSIAERL RRERIAERMK ALQELVPSCN KTDRAAMLDE IVDYVKFLRL QVKVLSMSRL  240
GGAGAVAQLV ADVPLSAVEG EGIEGGTNQQ AWEKWSNDGT EQQVAKLMEE DVGAAMQFLQ  300
SKALCIMPIS LAPAIFRTHQ PDATTLVKPE SNSSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1189194RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.31e-60bHLH family protein