PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g313930.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 335aa MW: 35566 Da PI: 6.044 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31.3 | 3.7e-10 | 184 | 228 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h+++Er RR+ri +++ L+el+P++ K + a++L + v+Y+k L Pd.00g313930.m01 184 HSIAERLRRERIAERMKALQELVPSC-----NKTDRAAMLDEIVDYVKFL 228 99***********************8.....6****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 335 aa Download sequence |
MAGNPPEGLG DDFFEQILAV PPSYSTGGAD SAGGGYGDVG SMPMVLQLGS GGSSSAGGGG 60 GYRGVGMGMG MPLGLNLEQG GFIGPERFRE LREEVEANTN NNINTSNVSA SVSSAMNERD 120 SVHMTNLFPA FGHLQNHSLR PTPPPPQPHQ FHSQPSPGPV AAVHHPPAIR PRVRARRGQA 180 TDPHSIAERL RRERIAERMK ALQELVPSCN KTDRAAMLDE IVDYVKFLRL QVKVLSMSRL 240 GGAGAVAQLV ADVPLSAVEG EGIEGGTNQQ AWEKWSNDGT EQQVAKLMEE DVGAAMQFLQ 300 SKALCIMPIS LAPAIFRTHQ PDATTLVKPE SNSSS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 189 | 194 | RLRRER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G02590.3 | 1e-60 | bHLH family protein |