PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g313710.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CPP

Protein Properties

Length: 753aa MW: 82299.7 Da PI: 6.1362

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g313710.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	47.5	3.7e-15	486	522	3	39
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 +k+CnCk+skClk+YC+Cfaag +C e C+C++C+Nk Pd.00g313710.m01 486 CKRCNCKRSKCLKLYCDCFAAGLYCIEPCSCQECFNK 522 79**********************************8 PP
2	TCR	51.6	1.8e-16	570	609	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+gCnC+ks ClkkYCeCf+ g+ Cs C+C +CkN+ Pd.00g313710.m01 570 RHKRGCNCRKSGCLKKYCECFQGGAGCSILCRCIGCKNTF 609 589***********************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 753 aa Download sequence
MDTPLKNQTT TPTTPLPSKY EDSPVFNYIS NLSPIEPVKS RGNDHTFNSL TFASLPSIFT 60 SPQNVSLGET RFSLKRHHSS EASNPESFQT PNPSDKLEGV PVAVEQSYFG TKQSECFTPG 120 SSGTEVTNAI PAENLELAIE LSNTLKYSSG SPDRNVPCDA TGTVLETAAT PASLVQSVVH 180 HSEERHSSFE RETHLRRIFG MEREKEAAGV DWTRLISDAS DLLNFDSTTI EESSDGEDPK 240 TVDPGAICFI SNILQDNHDD MEVMESGPID SSEQYESGKF SNQSEGIGDL KETDEAPAVL 300 SRNLLDKLNV DDKCPNCIHS SCKHSSQSYA ISRRCLDFDR AETHKRKSIC DTSGSYSVPL 360 QSNCEVTLVE KKLIRTTAGC DYSSSRLPGI GLHLNALATT SESNLSKVVN HETQASESQV 420 TETPNSKISS TCFTPSEVSR DESCRSEVHI AETPPEACAP VGVESDHSSP ENKRLKSQHV 480 GESLACKRCN CKRSKCLKLY CDCFAAGLYC IEPCSCQECF NKPIYENIVV ETRRLIESRN 540 PLAFAPKVIG SINATPQFGE ETNSTPTSAR HKRGCNCRKS GCLKKYCECF QGGAGCSILC 600 RCIGCKNTFG RKDEAEESEI EEHKSRVRKK DATDVSLGRV KDQDLPMTLP GICRPSGQLT 660 ASFSGKKIFS LHSVLSSPQP ERHLQVIPEE ETLEALDNSC SQPSGVKSTS PNSKRVSPPH 720 SGSEFGSAAW RGGRKLVLRS IPPFPTLASP RKH

Sequence ? help Back to Top

Protein Sequence Length: 753 aa Download sequence

MDTPLKNQTT TPTTPLPSKY EDSPVFNYIS NLSPIEPVKS RGNDHTFNSL TFASLPSIFT  60
SPQNVSLGET RFSLKRHHSS EASNPESFQT PNPSDKLEGV PVAVEQSYFG TKQSECFTPG  120
SSGTEVTNAI PAENLELAIE LSNTLKYSSG SPDRNVPCDA TGTVLETAAT PASLVQSVVH  180
HSEERHSSFE RETHLRRIFG MEREKEAAGV DWTRLISDAS DLLNFDSTTI EESSDGEDPK  240
TVDPGAICFI SNILQDNHDD MEVMESGPID SSEQYESGKF SNQSEGIGDL KETDEAPAVL  300
SRNLLDKLNV DDKCPNCIHS SCKHSSQSYA ISRRCLDFDR AETHKRKSIC DTSGSYSVPL  360
QSNCEVTLVE KKLIRTTAGC DYSSSRLPGI GLHLNALATT SESNLSKVVN HETQASESQV  420
TETPNSKISS TCFTPSEVSR DESCRSEVHI AETPPEACAP VGVESDHSSP ENKRLKSQHV  480
GESLACKRCN CKRSKCLKLY CDCFAAGLYC IEPCSCQECF NKPIYENIVV ETRRLIESRN  540
PLAFAPKVIG SINATPQFGE ETNSTPTSAR HKRGCNCRKS GCLKKYCECF QGGAGCSILC  600
RCIGCKNTFG RKDEAEESEI EEHKSRVRKK DATDVSLGRV KDQDLPMTLP GICRPSGQLT  660
ASFSGKKIFS LHSVLSSPQP ERHLQVIPEE ETLEALDNSC SQPSGVKSTS PNSKRVSPPH  720
SGSEFGSAAW RGGRKLVLRS IPPFPTLASP RKH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	2e-85	CPP family protein