PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g311570.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 310aa    MW: 34156.4 Da    PI: 6.2356
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g311570.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR184.61.6e-26186272190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fYn+YAke+GFsvr+++s+k+k+++ei ++++vCskeg +++   +   ++r+r  tr gCkakl v k+k+g+++v+ +++ HnH+l+
  Pd.00g311570.m01 186 EFYNNYAKEAGFSVRINSSRKNKETNEILRKEYVCSKEGVPAKGVGE---KKRRRGITREGCKAKLAVVKSKSGTYVVSLFVEGHNHPLT 272
                       6*****************************************98877...9999**********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MEVIGANLST NPDVIVAETQ LVTQPSGIRG VDRRVIDGPS PIPDHQVVSL GLETTSVDPA  60
TVREEVQISP DHSSDPRDQT DHSTDGQTLQ TANASGVPPV IPVTLSAEHA SQILQLPSDV  120
SIPILTDQQP EMDYMAEELD GHSEGVGQYR LNSDSNSCDK IYIPQLRDDH KPKSGQGFES  180
LDDAHEFYNN YAKEAGFSVR INSSRKNKET NEILRKEYVC SKEGVPAKGV GEKKRRRGIT  240
REGCKAKLAV VKSKSGTYVV SLFVEGHNHP LTSPKRVHLL RLKITWKYKC ELHTTVMNMG  300
HLALESILCE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-22FAR1 family protein