PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g311320.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

GRF

Protein Properties

Length: 445aa MW: 48354.7 Da PI: 6.3445

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g311320.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	72.2	6.2e-23	164	202	1	39
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrs 39 d+ep+rC+RtDGKkWRCsr+v +++k+CErH h++r++ Pd.00g311320.m01 164 DPEPWRCKRTDGKKWRCSRDVAPDQKYCERHAHKSRNQP 202 79**********************************986 PP
2	QLQ	52.7	1.3e-18	103	136	2	35
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35 +FT+aQ ++L++Q ++y+y+++++PvPp+Ll++i Pd.00g311320.m01 103 PFTPAQREELERQTMIYRYMMSSAPVPPHLLVPI 136 8********************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 445 aa Download sequence
MGKRNGFVVA SEKGTAEETT ECCDIGGGSF GGEGCGVFEH SASGPLFCNT SNPVTSCISD 60 IYNAVGSDFG SVVPKSLQQP YSDHSLSFSP SVGGMVNVNV RLPFTPAQRE ELERQTMIYR 120 YMMSSAPVPP HLLVPIAKNP SNVAHLYPNL VRGSLELGFS SNSDPEPWRC KRTDGKKWRC 180 SRDVAPDQKY CERHAHKSRN QPTPFSTNMV SPTVPSHAQP RSMGWFMKGE TPTAPTAGGS 240 NQEWEQMMQF KLGLKSCYTK CNTDVDVSKQ QNESSFNLYR EYTGESQGLQ TQRPSHDQYG 300 LLLSPKLAHL EGTLNSNQTQ QTRHFIDAWS TTTERDSSIG EIGNRGYVSS NQKLPFSSLA 360 LSMSRGNETN EDTDNTQMGL GILGSERENV GDLKSQWMNP LSCMSSPPGG PLAEALCLGI 420 ASSTRATSSN GCISDSTSSG DGVYT

Sequence ? help Back to Top

Protein Sequence Length: 445 aa Download sequence

MGKRNGFVVA SEKGTAEETT ECCDIGGGSF GGEGCGVFEH SASGPLFCNT SNPVTSCISD  60
IYNAVGSDFG SVVPKSLQQP YSDHSLSFSP SVGGMVNVNV RLPFTPAQRE ELERQTMIYR  120
YMMSSAPVPP HLLVPIAKNP SNVAHLYPNL VRGSLELGFS SNSDPEPWRC KRTDGKKWRC  180
SRDVAPDQKY CERHAHKSRN QPTPFSTNMV SPTVPSHAQP RSMGWFMKGE TPTAPTAGGS  240
NQEWEQMMQF KLGLKSCYTK CNTDVDVSKQ QNESSFNLYR EYTGESQGLQ TQRPSHDQYG  300
LLLSPKLAHL EGTLNSNQTQ QTRHFIDAWS TTTERDSSIG EIGNRGYVSS NQKLPFSSLA  360
LSMSRGNETN EDTDNTQMGL GILGSERENV GDLKSQWMNP LSCMSSPPGG PLAEALCLGI  420
ASSTRATSSN GCISDSTSSG DGVYT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24150.1	3e-41	GRF family protein