PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g311220.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 440aa MW: 49419.6 Da PI: 7.5221 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35.7 | 1.5e-11 | 311 | 357 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr+++P+ K++ ++ L Av YI++L+ Pd.00g311220.m01 311 NHVEAERQRREKLNHRFYVLRSVVPNV-----SKMDRSSLLADAVAYINQLK 357 799***********************6.....5*****************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 440 aa Download sequence |
MEEIIASSSS PQFCQETAAT CQQRLQFIVQ NRPEWWVYAI FWQASKDSND QISLSWAGGH 60 FKSSKDLASK RSNKVMNNYQ PKFGFNNVER KKVINRGCAE SLFQEDLEDL DMRLVDHGVG 120 DVTDSEWFYF YSVSLTQSFA AGHATNNILG RAFCSGGFVW LAGAHELQFY ECERVKEARM 180 HGIQTLVCIA TPCGVLELAS LDVIKEDWGL VHLSKSLFGS DNNRISKQGS RDGNAPVPFP 240 ESGMFSGPQK DFPRQEGDTK EAAPINIGGS SSDSPSDSVG NFASENTERT RLKKRGRSTN 300 HGPGRESQLL NHVEAERQRR EKLNHRFYVL RSVVPNVSKM DRSSLLADAV AYINQLKSKV 360 EELEAKIQSQ PQNPKMGNCP DQDYPYAKLM NALKSLGLQV YHASISSVKE TMIQDIVARV 420 PYGFTSEEAM RMGIVKRWYN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 292 | 298 | LKKRGRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00870.1 | 1e-52 | bHLH family protein |