PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g311220.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 440aa    MW: 49419.6 Da    PI: 7.5221
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g311220.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.71.5e-11311357455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h e+Er+RR+++N++f  Lr+++P+       K++ ++ L  Av YI++L+
  Pd.00g311220.m01 311 NHVEAERQRREKLNHRFYVLRSVVPNV-----SKMDRSSLLADAVAYINQLK 357
                       799***********************6.....5*****************95 PP

Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    
MEEIIASSSS PQFCQETAAT CQQRLQFIVQ NRPEWWVYAI FWQASKDSND QISLSWAGGH  60
FKSSKDLASK RSNKVMNNYQ PKFGFNNVER KKVINRGCAE SLFQEDLEDL DMRLVDHGVG  120
DVTDSEWFYF YSVSLTQSFA AGHATNNILG RAFCSGGFVW LAGAHELQFY ECERVKEARM  180
HGIQTLVCIA TPCGVLELAS LDVIKEDWGL VHLSKSLFGS DNNRISKQGS RDGNAPVPFP  240
ESGMFSGPQK DFPRQEGDTK EAAPINIGGS SSDSPSDSVG NFASENTERT RLKKRGRSTN  300
HGPGRESQLL NHVEAERQRR EKLNHRFYVL RSVVPNVSKM DRSSLLADAV AYINQLKSKV  360
EELEAKIQSQ PQNPKMGNCP DQDYPYAKLM NALKSLGLQV YHASISSVKE TMIQDIVARV  420
PYGFTSEEAM RMGIVKRWYN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1292298LKKRGRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00870.11e-52bHLH family protein