PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g311210.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 478aa MW: 53878.7 Da PI: 7.995

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g311210.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.5	1.7e-11	299	345	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr+++P+ K++ ++ L Av YI++L+ Pd.00g311210.m01 299 KHVEAERQRREKLNHRFYVLRSVVPNV-----SKMDRSSLLADAVAYINQLK 345 699*********************6.....5***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence
MEEIIPSSSP PQLFQENSVS FQQRLQFIVQ SRPEWWVYSI FWQASKDSND QVALSWAGGH 60 FKSPRDLASK RSNKMVNNKH FVERKKVINN REAESLFHEE MDLDMRLVDH GVGDVTDSEW 120 FYFYSISLTQ SFVAGHATNN ILGRSFCSGG FVWLAGDHEL QFYECERVKK ARMHGIKSLV 180 CIATPCGVLE LASLDVIKED LGVVHLSKSL FLSDNNRVSK QDSRARDGNA LVPPLESGML 240 SGGQKDLTKQ EGDTKEAAPI NIGGSSADSA DNFTSDNTES TRLKKIGRSS SNHAPQLLKH 300 VEAERQRREK LNHRFYVLRS VVPNVSKMDR SSLLADAVAY INQLKAKIEE LEDKIQSQPQ 360 NPKRGNVSNA DHHHYSQSTS PIVDFHHSNN NNTNRAAAAL EVDVKILGSE AVIRVQCPDQ 420 EYPYAKLMNA LKSLRLQVYH ASISNVKDLM IQNVVVRVPY GFTSDEAMRM GIIKKWYN

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence

MEEIIPSSSP PQLFQENSVS FQQRLQFIVQ SRPEWWVYSI FWQASKDSND QVALSWAGGH  60
FKSPRDLASK RSNKMVNNKH FVERKKVINN REAESLFHEE MDLDMRLVDH GVGDVTDSEW  120
FYFYSISLTQ SFVAGHATNN ILGRSFCSGG FVWLAGDHEL QFYECERVKK ARMHGIKSLV  180
CIATPCGVLE LASLDVIKED LGVVHLSKSL FLSDNNRVSK QDSRARDGNA LVPPLESGML  240
SGGQKDLTKQ EGDTKEAAPI NIGGSSADSA DNFTSDNTES TRLKKIGRSS SNHAPQLLKH  300
VEAERQRREK LNHRFYVLRS VVPNVSKMDR SSLLADAVAY INQLKAKIEE LEDKIQSQPQ  360
NPKRGNVSNA DHHHYSQSTS PIVDFHHSNN NNTNRAAAAL EVDVKILGSE AVIRVQCPDQ  420
EYPYAKLMNA LKSLRLQVYH ASISNVKDLM IQNVVVRVPY GFTSDEAMRM GIIKKWYN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	2e-58	bHLH family protein