PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g310660.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | Nin-like | ||||||||
Protein Properties | Length: 989aa MW: 109031 Da PI: 5.2983 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 91.8 | 5.2e-29 | 589 | 640 | 1 | 52 |
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isle+l++yF++++kdAAk+Lgvc+T++KriCR++GI+RWP+Rkik++ Pd.00g310660.m01 589 AEKSISLEVLQQYFAGSLKDAAKSLGVCPTTMKRICRHHGISRWPSRKIKKV 640 589***********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 989 aa Download sequence |
MVEPEEESRA QAIPPKSKNI VDDREAALME FDLDLDAFWP LDPIHFPSNP TSPPLFSSTD 60 QPCSPSWGFP DDDADNDDKL AGQVDQALSD RPQFSSYVPD LGREIPRENE DRRMLTSPFL 120 GLEPVENPNA YCLIKEKITQ ALRQLKELTD QHVLAQVWAP VKNEGRYVLT TSGQPFVLDP 180 YTNGLHQYRM ASLMYMFSVD GESDGMLGLP GRVFQKKLPE WTPNVQYYSI KEYPRLGHAQ 240 HYNVQGTLAL PVFEPSGRSC VGVLELIMTS PKINYASEVN KVCKALEAVS LKSSEIHTSM 300 QIQICNEGRQ TALTEILEIL TVVCETHKLP LAQTWVPCMH RNVLAYGGGL KKSCTSFDGS 360 CMEQVCMSTT DAAFYIVDAP MWHFREACVE HHLQEGQGVA GRAFLSRNAC FCRDITQFCK 420 TDYPLVHYAR MFKLTSCFAL CLQSTHTGND DYILEFFLPP SITDSYEQQT LLGSLLAIIK 480 NHFQSLKVAS GIILEEEGLV EMVQASTNKG LDSRLECIRI PRSAETPPGP ALPNGEEMVQ 540 LDSSKPQLLV DFDPANDGSN AVNEGGGNNI SCPENKDIKK KSEKKRGKAE KSISLEVLQQ 600 YFAGSLKDAA KSLGVCPTTM KRICRHHGIS RWPSRKIKKV NHSLSKLQRV IESVQGAEGA 660 FGLTSLTASP RSGAVGSISR PYILNGSNQQ SSPSSKPSEL HGEKKDSPTP TTPGKEGQAW 720 IENQLLDGGI LSQEELLLEH GRFLLDDGKG SNTSKTGSSS REASAGTPTS HGSCQGSPAN 780 GNELVNNHFV PSIHDRCIKV NGFPESAVRP PKEPNLSFAC SMPDVVLMTD PEEPCRGMLI 840 EDAGSSKDLK NLCPQVDAMV DEQVPEACCT NPPCSDSALK PSNTMPHIIA RQEMKSVTIK 900 ATYKEDIIRF RISMSSGIVE LKDEVAKRLK LEMGTFDIKY VDDDLEWVLV ACDADLQECM 960 EICRSLGIKM IRLSVHDIMS NFGSSCGSM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G64530.1 | 0.0 | Nin-like family protein |