PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g309930.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 248aa MW: 27991.7 Da PI: 8.9545 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.5 | 3.8e-19 | 55 | 105 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +g+WvAeIr p + r r++lg+++tae Aa a+++a+ kl+ge Pd.00g309930.m01 55 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYDTAEAAAYAYDRAAYKLRGE 105 59******9.**********954...5**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MDTMQDIYLH QRDLLQKFSE ESRANAAVSR FFQKNPVQSS ACSSTTYMAP CKKKLYRGVR 60 QRHWGKWVAE IRLPQNRMRV WLGTYDTAEA AAYAYDRAAY KLRGEYARLN FPNLKDPSKM 120 GFGDCARLNA VKTSVDAKIQ AICQKVKRER AKKNAKKSSN SSENEKAVMK VDSSPSSSGF 180 GDGSGQELVS LTATPTVSED WVWRCENSPP SISTEWPMGM AEDLEFEGCS LARMPSYDPE 240 LIWEVLAN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G64380.1 | 5e-40 | ERF family protein |