PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g309490.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 333aa    MW: 36907.9 Da    PI: 4.6924
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g309490.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.92.8e-19116166155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       ++++GVr+++ +g+W+AeIrdp     r  r +lg+++taeeAa  +++a+ +l+g
  Pd.00g309490.m01 116 KKFRGVRQRP-WGKWAAEIRDPL----RrVRLWLGTYDTAEEAAMVYDNAAIQLRG 166
                       59********.**********72....45*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MNLAVKYTQH RSHTKLVANS AAEFDSVRPR VVRISVTDGD ATDSSSDDEP AESSFCGRRR  60
VKRFINEITI ESCSRETDAV WRSRTTRTGR KRASPKSGGQ VGRRTLKAVA AAPAGKKFRG  120
VRQRPWGKWA AEIRDPLRRV RLWLGTYDTA EEAAMVYDNA AIQLRGPDAL TNFAAPPAKS  180
LPDVKPVISS CYNSGDESHN NLCSPTSVLR CPSPSNEEAD SPSLKEEVPD IAEFRNVRDD  240
SCVSENFSEF SEYTSFESFI PDDIFDFQIP DFLEETSLRE VGILKEDFGD LGNFGDILVD  300
SVLDFGFGSS AWCVDDHFQD IGDLFSSDPL VAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.13e-44ERF family protein