PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g308850.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CAMTA

Protein Properties

Length: 273aa MW: 30845.1 Da PI: 5.2056

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g308850.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	188.7	5.7e-59	21	136	4	118
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 e ++rwl++ ei++iL nf+k+++++e+++rp+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+hekLKvg+v+vl+cyYah+een++fq Pd.00g308850.m01 21 EaQHRWLRPAEICEILSNFQKFHISSEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQ 113 449**************************************************************************************** PP CG-1 96 rrcywlLeeelekivlvhylevk 118 rr+yw+Le++l +iv+vhylevk Pd.00g308850.m01 114 RRSYWMLEQDLMHIVFVHYLEVK 136 ******************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MAERGSYSQG PRLDFQQLLG EAQHRWLRPA EICEILSNFQ KFHISSEPPN RPPSGSLFLF 60 DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKVGSVDVLH CYYAHGEENE NFQRRSYWML 120 EQDLMHIVFV HYLEVKGNRA NAGGIREIDE VTPDLQKGSS WTSSPSNSNC RTPSGNTDYT 180 SPSSNLTSCE DADSGDSRQA SSFQSSFDSQ QMGNGPLTDK ADINLSLHPH LSKDLYVSDM 240 ATDGSELKVE GGDDLIDIDK LLDDDTFMSI AFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	2e-90	CAMTA family protein