PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g307370.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 302aa MW: 33882 Da PI: 8.1679 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.4 | 6.9e-18 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+ Ed++l+ +v+++G g+W + +++ g+ R++k+c++rw++yl Pd.00g307370.m01 16 KGLWTPAEDQKLLAYVQKHGHGNWQSLPQKAGLQRCGKSCRLRWRNYL 63 678********************************************7 PP | |||||||
2 | Myb_DNA-binding | 47.5 | 4.1e-15 | 69 | 112 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++ +Ed+ +++++++lG++ W++I ++++ +Rt++++k++w++ Pd.00g307370.m01 69 RGNFSLQEDQTIIQLHALLGNR-WSAITAHLP-KRTDNEVKNYWHS 112 89********************.*********.***********86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 302 aa Download sequence |
MGNSTHDCVA SSGVKKGLWT PAEDQKLLAY VQKHGHGNWQ SLPQKAGLQR CGKSCRLRWR 60 NYLRPDIKRG NFSLQEDQTI IQLHALLGNR WSAITAHLPK RTDNEVKNYW HSRLKKRLAL 120 KGGYDPVTHK PKNTIFGFAN GSTDDPKTGS NLNHIAQWES VRLQAEARYV RDSELHKQAY 180 HPYNNNDIST ASSILSSYNE DFGQNVPQCL DICSFGNRLA GDFEPPTISA ISNNGSSLMD 240 CFVHEPVGQC FDENYGTSIT EPFATVHHNM GFKNNGACLE DFGLWEIIMQ GKRDCPISGI 300 SM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01140.1 | 6e-83 | MYB family protein |