PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g307360.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 246aa MW: 27378.6 Da PI: 7.3068 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 22.5 | 2.6e-07 | 6 | 28 | 22 | 46 |
T-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 22 gtWktIartmgkgRtlkqcksrwqk 46 + W++I ++++ +Rt++++k++w++ Pd.00g307360.m01 6 R-WSAITAHLP-KRTDNEVKNYWHS 28 4.*********.***********86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MRNLNRWSAI TAHLPKRTDN EVKNYWHSRL KKRLALKGYD PVTHKPKTTI FGSANGSTDD 60 RKTGSNLNHI AQWESARLQA EARFVRDSEL HKQAQNLYNN NDISTASSIL LGHNKDFGPT 120 NQLFGQNTPQ CLDILRAWES ILMSNYSKAT GGQDHVNSFG NGLAGDFEPP IISAISSSNG 180 SSLMDCFFHE PVGQCFDENY GTSITEPFAA VHHNMGFKNG ACLEDFGLWE IIMQGRKDCP 240 ISGISM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01140.1 | 9e-31 | MYB family protein |