PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g303890.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 245aa MW: 27569.5 Da PI: 4.6016 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.8 | 1.1e-17 | 5 | 52 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv ++++G g+W++ ++ g+ R++k+c++rw +yl Pd.00g303890.m01 5 KGPWTPEEDQILVSFIEKYGHGNWRALPNQAGLLRCGKSCRLRWINYL 52 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 52.7 | 9.9e-17 | 58 | 103 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T eE+e ++++++lG++ W++Ia++++ gRt++++k+ w+++l Pd.00g303890.m01 58 RGNFTREEEEAVIKLHEMLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 103 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MGLKKGPWTP EEDQILVSFI EKYGHGNWRA LPNQAGLLRC GKSCRLRWIN YLRPDIKRGN 60 FTREEEEAVI KLHEMLGNRW SAIAARLPGR TDNEIKNVWH THLKKRLKDQ TSTSSPASSA 120 SNVTSQSAEP ENMNSPQPSS SSSDVSSVTE VSAALTHDNH QDMITIKGEN MELSETFPEI 180 DDSFWSEALS ADNSSIPLEF PEATNDQYSG ELGFTFCPNM DDGMEFWYDL FIRAGHGDTP 240 ELPEF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31180.1 | 6e-75 | MYB family protein |