PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g303710.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 223aa    MW: 25404.9 Da    PI: 5.7966
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g303710.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.82.2e-0969116454
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       a+  rE+ RR+r+N++f eL  +l +    + +K +K +iL  A++ + +L
  Pd.00g303710.m01  69 AKACREKLRRERLNDRFVELSAVLEPG---RPPKSDKPAILDDAIRVLTQL 116
                       6778**********************8...89**************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MYSLMEEWIE YLDYIEETTQ PSDFLWPNDT PSFREFEFSA VDVPAAFSPE KECPRKRGRT  60
DSSCSGSGAK ACREKLRRER LNDRFVELSA VLEPGRPPKS DKPAILDDAI RVLTQLRAEA  120
QELKETNEKL LEEVKSLKAE KNELREEKLV LKADKERLEK QLKGMAISPS GFVPTHPAVP  180
AAYHPGASKM AMYPSYSLVP MWHYLPPSVR DTSRDHELRP PAA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15460PRKRGRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14410.23e-73bHLH family protein