PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g303510.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 197aa    MW: 21929.1 Da    PI: 9.0724
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g303510.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.97.5e-055072123
                      EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                      y+C+ C++ F++   L  H+++H
  Pd.00g303510.m01 50 YTCSFCKREFRSAQALGGHMNVH 72
                      9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MEKNRLSNNL KDHGIVTRAI RDSNNKRIIH CSQSCEEDYI NGFSWPPRSY TCSFCKREFR  60
SAQALGGHMN VHRKDRARLK NSPPIDGHSL SLPSLISPPL PPPPPPIFSV PSSENMKWVV  120
GGTLFNHPLN LKASNLSTKL KGAKSLCGVG QEDQDGCIKT LKKAADPHQI LRLDLEIGMF  180
GDTNKEDLDL ELRLGYS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23130.15e-25C2H2 family protein