PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g301090.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 411aa    MW: 45803.5 Da    PI: 4.7088
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g301090.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH382.9e-12188239155
                       CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +r++h ++Er+RR+++N+ +  Lr+l+P +   + ++ + a+i   A+e++++L+
  Pd.00g301090.m01 188 QRMTHIAVERNRRKQMNEHLRVLRSLMPGS---YVQRGDQASIIGGAIEFVRELE 239
                       79****************************...9*****************9995 PP

Sequence ? help Back to Top
Protein Sequence    Length: 411 aa     Download sequence    
MEKEENNYSA FMPPGNFNNL DYTLDHHHDE DQQMMKSRVD ETPTPAGFCG STSTSFDKLS  60
FADVMQFADF GPKLGLNQTK ISEEEPSGVD PVYFLKFPVL NDKFDNDVMV PQAEERFAGL  120
GEEGKTKSME EDQDEEARVS GSNSVQQLQF LGEDLENNPR GGVEPEPAAK NKRKRPRTTK  180
TTQEVESQRM THIAVERNRR KQMNEHLRVL RSLMPGSYVQ RGDQASIIGG AIEFVRELEQ  240
LLQCLESQKR RRLLGEAPRH EVGESAGAMA MAVMPAVQAA QGGSGGPLIF PAANLPVNPN  300
DPIKFVDFET GLREETAENK SCFADVEVKV LGFDAMIKIL SQRRPGQLIK AIAALEDLQL  360
NILHTNITTI EQTVLYSFNV KVESESRFTA EDIATSVQQI FSFIHANTAS M
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1189200RMTHIAVERNRR
2249253KRRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24140.11e-121bHLH family protein