PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g301090.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 411aa MW: 45803.5 Da PI: 4.7088 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 38 | 2.9e-12 | 188 | 239 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ + Lr+l+P + + ++ + a+i A+e++++L+ Pd.00g301090.m01 188 QRMTHIAVERNRRKQMNEHLRVLRSLMPGS---YVQRGDQASIIGGAIEFVRELE 239 79****************************...9*****************9995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 411 aa Download sequence |
MEKEENNYSA FMPPGNFNNL DYTLDHHHDE DQQMMKSRVD ETPTPAGFCG STSTSFDKLS 60 FADVMQFADF GPKLGLNQTK ISEEEPSGVD PVYFLKFPVL NDKFDNDVMV PQAEERFAGL 120 GEEGKTKSME EDQDEEARVS GSNSVQQLQF LGEDLENNPR GGVEPEPAAK NKRKRPRTTK 180 TTQEVESQRM THIAVERNRR KQMNEHLRVL RSLMPGSYVQ RGDQASIIGG AIEFVRELEQ 240 LLQCLESQKR RRLLGEAPRH EVGESAGAMA MAVMPAVQAA QGGSGGPLIF PAANLPVNPN 300 DPIKFVDFET GLREETAENK SCFADVEVKV LGFDAMIKIL SQRRPGQLIK AIAALEDLQL 360 NILHTNITTI EQTVLYSFNV KVESESRFTA EDIATSVQQI FSFIHANTAS M |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 189 | 200 | RMTHIAVERNRR |
2 | 249 | 253 | KRRRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24140.1 | 1e-121 | bHLH family protein |