PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g298350.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 282aa    MW: 31634.2 Da    PI: 5.411
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g298350.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.81.9e-08175222455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h+ +Er RR riN+++  L+ ++P +    sk +  a +L + ++Y++sLq
  Pd.00g298350.m01 175 SHSLAERVRRGRINERLRCLQNIVPGC----SKTMGMAVMLDEIINYVQSLQ 222
                       8*************************9....788*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MAEFTSDMQS IAPSLPFLDI APNTNMEPIH QYTDQFNPTV LDFYSSLNFQ TCMPFSNDNY  60
FSSQGPEFQG NLVQNFPNFF DHDNKSNQND EAPAVQHLVG AGAGNGFQES KKKRAMDDVS  120
ESSSGISTPP VSETGVKIKN SSGRGKRLKK SNEKEDEKPK DVVHVRARRG QATDSHSLAE  180
RVRRGRINER LRCLQNIVPG CSKTMGMAVM LDEIINYVQS LQNQVEFLSM KLTAASSFYD  240
FNSETDDMET MQSAKVYEAV ELERMKREGY GGYGSFHSTW SL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1111139KKKRAMDDVSESSSGISTPPVSETGVKIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73830.11e-66bHLH family protein