PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g298210.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 357aa    MW: 40335.1 Da    PI: 4.8171
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g298210.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.49.9e-15114159352
               AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkk 52 
                       ykGVr++k +g+++AeIrdp     + +r +lg+f taeeAa+ + + +++
  Pd.00g298210.m01 114 YKGVRRRK-WGKYAAEIRDPI----QrRRKWLGTFATAEEAAAVYQKKKLE 159
                       9****998.**********83....35***************999877765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    
MPGFKTLVLN QHVKLSKLKT KQPNKEENTS SVKRIRIIYN DPDATDSSSD DEEYDGKEDR  60
LLHDKRFVSE ILVVDTKYEP SADVLSHCKT NGGKIGLSMN FYDCKKTKRS SSMYKGVRRR  120
KWGKYAAEIR DPIQRRRKWL GTFATAEEAA AVYQKKKLEF DSIQSLGKTQ RHYQNLQLSD  180
KDKGAFESFQ LTERTKHEFQ GIPLSEESQD SLGDADIETF SAEETKRVFC HPSPSSVLEI  240
SGTASLGIGL KQVKEESSVE VFGGEGSVQP FFEEDLSILK FPEEPMLPLD TEQLDLGCGE  300
NYMFSSLDQF FDGMSDIVDY PAFNDGNGKA ICLPTLDSDF GQQDFAWIDQ NLNMACP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1115121KGVRRRK
2118138RRRKWGKYAAEIRDPIQRRRK
3119139RRRKWGKYAAEIRDPIQRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.13e-26ERF family protein