PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g297860.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family TCP
Protein Properties Length: 201aa    MW: 22583.6 Da    PI: 8.9887
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g297860.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP104.12.3e-3255136373
               TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.........ssssa..sec 73 
                        k+drhski T++g+RdRR+Rls+e+a++fF Lqd L fdk+skt+eWLl qa p+ik+l+g+         s+s+a  ++c
  Pd.00g297860.m01  55 CKRDRHSKINTARGLRDRRMRLSLEVARKFFWLQDALHFDKASKTVEWLLIQATPEIKKLVGDckhmmsstkSTSPAtsESC 136
                       69*************************************************************7777665442222221222 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MREAVAANNT LADDHRQTTT TSATLNIKMV DWDSNKNHGE MMNMDQPQIP RRRSCKRDRH  60
SKINTARGLR DRRMRLSLEV ARKFFWLQDA LHFDKASKTV EWLLIQATPE IKKLVGDCKH  120
MMSSTKSTSP ATSESCEVIS GIDEAATNTN IHINIDGGND GDDKLIQSCE IQPSAKERKV  180
QVPLRPVPAG YPNPATLTRS D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18550.22e-24TCP family protein