PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g296640.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 263aa    MW: 28678.4 Da    PI: 5.7705
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g296640.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.25.3e-3169127259
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp++++itY++eHnh+
  Pd.00g296640.m01  69 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRVDPSMLVITYSSEHNHP 127
                       69*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MSDQEENDNT TSSTPENSSG SPPPPTTNFS DFSKITSTSS PKKSARRAIQ KRVVSIPIKG  60
DNSNTPPPSD SWAWRKYGQK PIKGSPYPRG YYRCSSSKGC PARKQVERSR VDPSMLVITY  120
SSEHNHPWPA SRNHHNHHQS NSSSSAAAAV TNKPGSNKTE APEAQQPEHQ DHDPTFADLN  180
NESLLTHDEF GWFADMETTS STVLESPIFA ESGCAGGADS ADMAAMVFPM GEEDELLFAD  240
LGELPECSLV FRHRGVGPQV QIC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.14e-71WRKY family protein