PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g295790.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 337aa    MW: 37210.9 Da    PI: 7.1129
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g295790.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY106.81.1e-33182239259
                       --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                       +Dgy+WrKYGqK vk+s++prsYYrCt+++C vkk+vers edp++v++tYeg+Hnh+
  Pd.00g295790.m01 182 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCGVKKRVERSFEDPSTVITTYEGQHNHP 239
                       8********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MSDHEHKDLY YHDLFQYEDH EHLNGGMISI NHNQNLQGIE VPSYMNNTSF SECLKGPMDY  60
NTLATAFGLA SSTSDEVIFS SANEGDQKPA EHIRYSGGGG DGDGGGGETP LTPNSSVSSS  120
SAEAGAEEDS GKSKKDRQPK GSSEDGGDSS KKVMSKAKKK GEKKQREPRF AFMTKSEVDH  180
LEDGYRWRKY GQKAVKNSPY PRSYYRCTTQ KCGVKKRVER SFEDPSTVIT TYEGQHNHPL  240
PATLRGNAAA SSAFFPHAAA AFNYAPITGS AGPSSNFPQE LLFQMPHHYM INNNSQGSSR  300
SVVVNPHHQQ QHQLPRADQR GLLQDLLFPS MFLKQEP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18170.14e-50WRKY family protein