PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g295210.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | Trihelix | ||||||||
Protein Properties | Length: 491aa MW: 53417.1 Da PI: 8.3309 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 49.8 | 9e-16 | 105 | 197 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm........rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 +W++ + +L+ea +e+ ++l+rg+l++ +Weev++ + + ++ +qCk+k++nl+kryk + ++ + s++ +f++l Pd.00g295210.m01 105 EWSDTAIACLLEAFTEKFNQLNRGNLRGRDWEEVAEMVsercgtggGNKSTYKTVEQCKNKIDNLKKRYKVELQRITSS-GLGASHWHWFKKL 196 5*************************************999999998888999*****************999998884.788889*****99 PP trihelix 86 e 86 e Pd.00g295210.m01 197 E 197 7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 491 aa Download sequence |
MASSDDFPLI DSSSHLHAPP RPRDTVDSTT TANNGDFFPR PFPDDLDRSP NQTRTPNTKR 60 SSYYYKKLKP SSANPNPTTS TTEAESSSGQ ETASQRGDYR KDREEWSDTA IACLLEAFTE 120 KFNQLNRGNL RGRDWEEVAE MVSERCGTGG GNKSTYKTVE QCKNKIDNLK KRYKVELQRI 180 TSSGLGASHW HWFKKLEVIL GSSLVPKGGG GSDEERSGGR ANSNVAKQPK RYAPGSTGFT 240 NNLKSKSMPN VKWKRVMLKI SGAALAGDCQ SIDPKVATQI AEEVARACRL GVEVAIVVGG 300 CNFFCGDTWV SSTGLDRSTA YQIGMMATVM NSILLQSALE KVGVQARVQT ALTMPEVSEP 360 YNRLRAIRHL EKGRVVIFGG IGAGTGNYLF TTDIAAALRA SELNAEAVLK GTNFNGIYEC 420 HSGSNIVTVD HTCYREVVSR GITSVDIMAL TYCEENGIPV VIFNLLEPGN ISRALCGDQV 480 GTLIDQAGRI G |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G10030.1 | 1e-175 | Trihelix family protein |