PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g288500.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 279aa    MW: 32191.3 Da    PI: 8.3104
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g288500.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR172.11.2e-2248134190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fYn+YA+e+GFsvr  +skks ++ge++++++vC+keg+ ++e+++    +r+r + r +Cka+l v k+k g ++vt +e+ H+H+++
  Pd.00g288500.m01  48 DFYNQYAREAGFSVRSYSSKKS-KDGEVIRKEYVCNKEGSWSTETSS--VVKRRRGVCRESCKARLIVVKSKYGGYVVTIFEEAHTHPMT 134
                       6*****************9999.8889****************9988..77888999******************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MEANNGILVH METDSETNPS VSIFYPQVIG ELTPFQGQQF ETLEEVYDFY NQYAREAGFS  60
VRSYSSKKSK DGEVIRKEYV CNKEGSWSTE TSSVVKRRRG VCRESCKARL IVVKSKYGGY  120
VVTIFEEAHT HPMTTPRRRH LLKSHRRISG VDQLVAQQLI SVNVSTHQQY DILATQAGGI  180
ENVGFTQQDM YNSNRDRRMK IKGHDGEMLF DHFMNEQEKN PGFIFKVETD IEHKITRCFW  240
ADAISRQSYK FYGMDNSSSS QMMFRSPVIP PISRVVELH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-33FAR1 family protein