PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g285020.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 119aa    MW: 14078.6 Da    PI: 6.125
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g285020.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.8e-192072156
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                      ++y+G+r+++ +g+++AeIrdps ng  +r +lg+f taeeAa+a+++a+  ++g+
  Pd.00g285020.m01 20 TRYRGIRRRP-WGKFAAEIRDPSRNG--ARLWLGTFETAEEAARAYDRAAFGFRGH 72
                      68********.**********98887..**********************988886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    
MEGKRVENQQ KEQTKVRDQT RYRGIRRRPW GKFAAEIRDP SRNGARLWLG TFETAEEAAR  60
AYDRAAFGFR GHLAILNFPN DYQGQEEDEV IEFEYLDNMV LEELLDTKED HHRQGKPTH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.15e-37ERF family protein