PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g284940.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 718aa MW: 80111.4 Da PI: 6.1864

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g284940.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.1	0.00037	547	584	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLrel+P+ a K s + Le++++++ Lq Pd.00g284940.m01 547 RQLIQDRIKELRELIPNgA------KCSIDSLLERTIKHMLFLQ 584 77899************77......7777779999999999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 718 aa Download sequence
MGTSDLHHVL RSLCFNTEWN YAIFWKLKYR ARMVLTWEDA YYDNCEQHDS SENRCFNKTL 60 DRLHDSHYSH DPLGLAVAKM SYHVYTLGEG IVGQVAVTRK HQWIFADNLF KNNCSPFQHC 120 DGWQSQFSAG IRTIVVVAVP HGVVQLGSLN KVSENVKLVS EIRDVFSTLQ DSPVEQIHNP 180 LQSGINNKVA NREESPDVWS SVFPHIGKDS DSSYVFPLPE NCLKKAVELA NKHGGLESSN 240 LGCLESAKLH QSKSSILNSE LSKLVGVELL DRTKCKGESS GCKDTRMASM IYANPLSHGS 300 VQENVNLCDS ADLSATFLNS AAHGKINVDR VDFYQNEVLQ VSEPSDVKFQ KDLENLDFQT 360 ESGHMDTSST SMAFPAGCEL HEALGSAFLN KGNYFDWEAE KNGDGITIEM PEGMKIGQLT 420 SDSCQEHLLE AVVANVCQSG NDVKSEKSFC KSMQSLLTTE KYPEPSSHIT HTIDSENYSI 480 DQPSLIAEDT QQCLSSSGVC GVISPKWFSS PCPSACSEQL ERSSGPSKNN KKRARPGENS 540 RPRPRDRQLI QDRIKELREL IPNGAKCSID SLLERTIKHM LFLQSITKHA DKLNKCADAK 600 LCHKEASMLG SSNYERGSSW AVEVEGNLKV CSIMVENLNK NGQMVVEMMC EECSHFLEIA 660 EAIRSLGLTI LKGVTEARSD KTWICFVVEG QNNRSIHRMD ILWSLVQILQ PKNPMQQL

Sequence ? help Back to Top

Protein Sequence Length: 718 aa Download sequence

MGTSDLHHVL RSLCFNTEWN YAIFWKLKYR ARMVLTWEDA YYDNCEQHDS SENRCFNKTL  60
DRLHDSHYSH DPLGLAVAKM SYHVYTLGEG IVGQVAVTRK HQWIFADNLF KNNCSPFQHC  120
DGWQSQFSAG IRTIVVVAVP HGVVQLGSLN KVSENVKLVS EIRDVFSTLQ DSPVEQIHNP  180
LQSGINNKVA NREESPDVWS SVFPHIGKDS DSSYVFPLPE NCLKKAVELA NKHGGLESSN  240
LGCLESAKLH QSKSSILNSE LSKLVGVELL DRTKCKGESS GCKDTRMASM IYANPLSHGS  300
VQENVNLCDS ADLSATFLNS AAHGKINVDR VDFYQNEVLQ VSEPSDVKFQ KDLENLDFQT  360
ESGHMDTSST SMAFPAGCEL HEALGSAFLN KGNYFDWEAE KNGDGITIEM PEGMKIGQLT  420
SDSCQEHLLE AVVANVCQSG NDVKSEKSFC KSMQSLLTTE KYPEPSSHIT HTIDSENYSI  480
DQPSLIAEDT QQCLSSSGVC GVISPKWFSS PCPSACSEQL ERSSGPSKNN KKRARPGENS  540
RPRPRDRQLI QDRIKELREL IPNGAKCSID SLLERTIKHM LFLQSITKHA DKLNKCADAK  600
LCHKEASMLG SSNYERGSSW AVEVEGNLKV CSIMVENLNK NGQMVVEMMC EECSHFLEIA  660
EAIRSLGLTI LKGVTEARSD KTWICFVVEG QNNRSIHRMD ILWSLVQILQ PKNPMQQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	0.0	bHLH family protein