PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g284770.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 203aa    MW: 22697.6 Da    PI: 8.383
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g284770.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.000212345123
                      EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                      y C+ C++ F++   L  H+++H
  Pd.00g284770.m01 23 YACSFCKREFRSAQALGGHMNVH 45
                      89*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MDCINFSFEG ENLCDISWAA KNYACSFCKR EFRSAQALGG HMNVHRRDRA RLRLLPPSLS  60
SEICPHNPNP SSYFSPSSSS SSSLSSSKGL PHNYSSCHSL LSPSLRALMS ATPSTDGNKK  120
PKFKYNSPQN HVPNLIPKKG KRGAVDHEAG EILKGFAQKD LDDEFNKVDD MKKESNIIRL  180
DLDMGFFKDH KEEVDLELRL GHL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23130.11e-14C2H2 family protein