PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g284740.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 499aa MW: 55359.5 Da PI: 5.2947

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g284740.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.7	8.7e-13	353	399	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq Pd.00g284740.m01 353 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAITYITDLQ 399 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 499 aa Download sequence
MGEKFWVNEE DRVMVESVLG TEACQFLTSL VSENVFTDLV RPPGKLGVQQ GLSQLVKGSN 60 WNYAIFWQVV GSKSGGSALI WGDGHCRDTK DGGVAGENSS LDGSFEGVQK KEEVKKWVLE 120 KLHACFGGLD EGYARRLDGV SDVEMFYLTS MYYAFQLDSH SGLGESYKSG KSIWVSDVGG 180 CLHHYQSRSY LARLAGFQTV VFVPMKSGVV ELGSVKANPE EQNLVNMVRN LFGESSSVQA 240 KAFPMIFGRE LSLGGPKSQS INIAFSPKIE EDSTFPPESF ELQSVGTSNG CQSEDSEVKL 300 FPQLNQMMVG GFSAPTIVSS LELPKDESSA QIDERKPRKR GRKPANGREE PLNHVEAERQ 360 RREKLNQRFY ALRAVVPNIS KMDKASLLGD AITYITDLQM KIRVMETENQ MGNNSQKQFP 420 VPEIDFQERH EDAVVRMNCP LDLHPVSEVI NTLREHKIVA QESNVSITDN DKVIHTFSIP 480 TEGGDAEQLK EKLVASLSK

Sequence ? help Back to Top

Protein Sequence Length: 499 aa Download sequence

MGEKFWVNEE DRVMVESVLG TEACQFLTSL VSENVFTDLV RPPGKLGVQQ GLSQLVKGSN  60
WNYAIFWQVV GSKSGGSALI WGDGHCRDTK DGGVAGENSS LDGSFEGVQK KEEVKKWVLE  120
KLHACFGGLD EGYARRLDGV SDVEMFYLTS MYYAFQLDSH SGLGESYKSG KSIWVSDVGG  180
CLHHYQSRSY LARLAGFQTV VFVPMKSGVV ELGSVKANPE EQNLVNMVRN LFGESSSVQA  240
KAFPMIFGRE LSLGGPKSQS INIAFSPKIE EDSTFPPESF ELQSVGTSNG CQSEDSEVKL  300
FPQLNQMMVG GFSAPTIVSS LELPKDESSA QIDERKPRKR GRKPANGREE PLNHVEAERQ  360
RREKLNQRFY ALRAVVPNIS KMDKASLLGD AITYITDLQM KIRVMETENQ MGNNSQKQFP  420
VPEIDFQERH EDAVVRMNCP LDLHPVSEVI NTLREHKIVA QESNVSITDN DKVIHTFSIP  480
TEGGDAEQLK EKLVASLSK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	335	343	RKPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16430.1	1e-171	bHLH family protein