PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g282290.m03

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 1168aa MW: 130429 Da PI: 9.8651

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g282290.m03	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.2	3.8e-08	45	81	3	41
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqck 41 W++ E e+++da +++G++ W+++a+ + +R+ +++ Pd.00g282290.m03 45 EWSKGELERFYDAYRKYGKD-WRKVAAAVR-NRSIEMVE 81 7***************99.*****.*98875 PP

Sequence ? help Back to Top
Protein Sequence Length: 1168 aa Download sequence
MAPTKKSKSV KRYATVNEAS PEKYGGGSNK KKQRKRKLSD KLGPEWSKGE LERFYDAYRK 60 YGKDWRKVAA AVRNRSIEMV EALYNMNRAY LSLPEGTASV VGLKAMMTDH YNVMEGSDSE 120 RESNDALGFS RKPQKRKLGK DQLSVSKDVF QSHSNASHEG CLSLLKRRRL DGGQPRAVGK 180 RTPRFPVSYA YKKDDRDTYV SPIKKGRRSE GDNDDEVAHV AALLTEASQR GGSPQISQTP 240 YRRPVHVKSS SVQSSERMHP PRGKARANLR DPSMDEDWLE GSIGSKGAET GDYARDSLEG 300 VGTVEINWKG KKFYGKKEKA KDIGNHQFDD GGEACSGTEE GLNVSSRGKD DIEVSNTKGE 360 RFSPQGQRKR SKKLYFGDES SCLDALQTLA DLSLMMPEST MESGSSVQLK EEGTNLDVED 420 KFSVPEATST SQSRNKNKIP SAKHRVPFAI SGVEGTNSKK SKLGREPAFD TTAVSESEQQ 480 LQSTTKTWKR KRKSSVSKIS NADAPIDSNI NEPLKIEAFG EEENKPVTKG KRTNQSSTPS 540 KQWKSTRSLE GSLNSDYRRT GTDLTVTTAQ APTSNHVNLP TKRISRRKMY IPRTLHPKEK 600 SSEKKIKNQL NIRSSSAQDR ALYLKEKTSC CLSSDLVRRW CTFEWFYSAL DYPWFAKREF 660 EEYLNHVGLG HIPRLTRVEW GVIRSSLGKP RRFSEHFLHE EREKLKQYRE SVRKHYAELR 720 TGDREGLPTD LARPLSVGQR VIALHPKTRE VHDGSVLTVD HDKCRVQFDR PDIGVEFVMD 780 VDCMPLNPLD NMPEALRRQN FAFEKFSLTS KEANKNGNLN FGGPHFEKAT SPMNTSVKQG 840 KGDSNHTTSQ PKAASADIDR AQAQQSTYSQ PGMVVAHNQA RDADIRALSE LTRALDKKEA 900 LLMELRNTNN NILENQNSGE CSLKDSEPFK KHYATVLVQL KEASGQVSSA LLNLRQRNTY 960 PANSLPPWLK QPANSTVYGG LPSSFDSSIS QESGSSVAEI VEVSRSKAHM MVNAAIQAMS 1020 SRKGGEDAYV RIREALDSID NQHLPSDSRL SLNRSQEQVN GNLGHRNQLI SSTSDPNFTS 1080 DSPGPKPNTD TEKTEAQVLS DVISACVMAV HMIQTCTERQ YPPAVVAQVL DYAVTSLHPR 1140 CPQNVGIYRE IQMCMGRIKT QILALVPT

Sequence ? help Back to Top

Protein Sequence Length: 1168 aa Download sequence

MAPTKKSKSV KRYATVNEAS PEKYGGGSNK KKQRKRKLSD KLGPEWSKGE LERFYDAYRK  60
YGKDWRKVAA AVRNRSIEMV EALYNMNRAY LSLPEGTASV VGLKAMMTDH YNVMEGSDSE  120
RESNDALGFS RKPQKRKLGK DQLSVSKDVF QSHSNASHEG CLSLLKRRRL DGGQPRAVGK  180
RTPRFPVSYA YKKDDRDTYV SPIKKGRRSE GDNDDEVAHV AALLTEASQR GGSPQISQTP  240
YRRPVHVKSS SVQSSERMHP PRGKARANLR DPSMDEDWLE GSIGSKGAET GDYARDSLEG  300
VGTVEINWKG KKFYGKKEKA KDIGNHQFDD GGEACSGTEE GLNVSSRGKD DIEVSNTKGE  360
RFSPQGQRKR SKKLYFGDES SCLDALQTLA DLSLMMPEST MESGSSVQLK EEGTNLDVED  420
KFSVPEATST SQSRNKNKIP SAKHRVPFAI SGVEGTNSKK SKLGREPAFD TTAVSESEQQ  480
LQSTTKTWKR KRKSSVSKIS NADAPIDSNI NEPLKIEAFG EEENKPVTKG KRTNQSSTPS  540
KQWKSTRSLE GSLNSDYRRT GTDLTVTTAQ APTSNHVNLP TKRISRRKMY IPRTLHPKEK  600
SSEKKIKNQL NIRSSSAQDR ALYLKEKTSC CLSSDLVRRW CTFEWFYSAL DYPWFAKREF  660
EEYLNHVGLG HIPRLTRVEW GVIRSSLGKP RRFSEHFLHE EREKLKQYRE SVRKHYAELR  720
TGDREGLPTD LARPLSVGQR VIALHPKTRE VHDGSVLTVD HDKCRVQFDR PDIGVEFVMD  780
VDCMPLNPLD NMPEALRRQN FAFEKFSLTS KEANKNGNLN FGGPHFEKAT SPMNTSVKQG  840
KGDSNHTTSQ PKAASADIDR AQAQQSTYSQ PGMVVAHNQA RDADIRALSE LTRALDKKEA  900
LLMELRNTNN NILENQNSGE CSLKDSEPFK KHYATVLVQL KEASGQVSSA LLNLRQRNTY  960
PANSLPPWLK QPANSTVYGG LPSSFDSSIS QESGSSVAEI VEVSRSKAHM MVNAAIQAMS  1020
SRKGGEDAYV RIREALDSID NQHLPSDSRL SLNRSQEQVN GNLGHRNQLI SSTSDPNFTS  1080
DSPGPKPNTD TEKTEAQVLS DVISACVMAV HMIQTCTERQ YPPAVVAQVL DYAVTSLHPR  1140
CPQNVGIYRE IQMCMGRIKT QILALVPT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	30	38	KKKQRKRKL
2	31	39	KKKQRKRKL
3	131	139	KKKQRKRKL
4	166	170	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein