PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g281650.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | GATA | ||||||||
Protein Properties | Length: 779aa MW: 86307.3 Da PI: 8.1587 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 55.2 | 9.7e-18 | 529 | 562 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 Cs C tt+TplWR gp g+k+LCnaCG+++rk+g Pd.00g281650.m01 529 CSDCMTTETPLWRGGPAGPKSLCNACGIRHRKRG 562 ********************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 779 aa Download sequence |
MSLRPNARAE VRRNRYKVAV DAEEGRRRRE DNMVEIRKNR REESLQKKRR EGLQPPQLSS 60 NLHSSGLEKK LEHLPSMVAG VWSDESSLQL EATTHFRKLL SIERSPPIEE VIQSGVVPRF 120 VEFLMREDFP QLQFEAAWAL TNIASGTSEN TKVVIDHGAV PIFVKLLSSP SDDVREQAVW 180 ALGNVAGDSP RCRDLVLGNG ALIPLLSQLN EHAKLSMLRN ATWTLSNFCR GKPQPPFDQV 240 KPALPALARL IHSNDEEVLT DACWALSYLS DGTNDKIQAV IESGVCPRLV ELLLHPSPSV 300 LIPALRTIGN IVTGDDMQTQ VIIQHQALPC LLTLLTNNYK KSIKKEACWT ISNITAGNKD 360 QIKAVIDAGI IAPLVSLLQG AEFDIKKEAA WAISNATSGG SHEQIKILVD QGCIKPLCDL 420 LICPDPRIVT VCLEGLENIL KVGEAEKNLG TTGGVNLYAQ AIDDAEGRCF SNWVQLWREW 480 HANCPIRRIQ LQLEKSSSLH SEVLEYGKAI IRSGQEPFPQ AMNGNKKRCS DCMTTETPLW 540 RGGPAGPKSL CNACGIRHRK RGIPTNKDLA SLVTVIAFDT ETTGFSRERD HIIEIALLDL 600 EGGENSAFQT LVNPERRVLN SHIHGITTNM VNRPDVPRME DLIPILLKYV KSRQKPGGCV 660 LFVAHNARTF DVPFLCNAFR RCGVDIPSDW LFKDTLPMGR EAMKSEGSKP SSRSISLQAL 720 REHLGIPLDG SAHRAMSDVK VLAAVFQRLT YMLKLPLASL VEDAFTASEI GTQKKKSSR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G49300.1 | 1e-17 | GATA family protein |