PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g277690.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | SBP | ||||||||
Protein Properties | Length: 426aa MW: 46851.6 Da PI: 8.3111 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 128 | 3.6e-40 | 179 | 256 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC++ l +akeyhrrhkvCe+hska++v+v g+eqrfCqqCsrfh +sefDe+krsCrrrLa+hnerrrk+++ Pd.00g277690.m01 179 RCQVEGCHVPLMNAKEYHRRHKVCEMHSKASKVTVLGQEQRFCQQCSRFHVVSEFDESKRSCRRRLAGHNERRRKSSH 256 6**************************************************************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 426 aa Download sequence |
MEIGGNMNMN MLGHDHNNNS HISSSSRGQN GNNNTYLTNW DIWGGATSTS AAATNNNSFY 60 SPAAVTVAAT AGASSSATCS EASAGGHAFI MGHPLQQQHS SFYGGGARAH YHPDPHLMCL 120 KLGKRHYFED HARAHAHALD DRHVAGLPVG VMSKRGRGGA AAQHLYGSGA TLALKVVPRC 180 QVEGCHVPLM NAKEYHRRHK VCEMHSKASK VTVLGQEQRF CQQCSRFHVV SEFDESKRSC 240 RRRLAGHNER RRKSSHDSLS RTSSQEKGRF GYLSTPTGRA LSLLSARNTG FDSWVSPSDL 300 SSRSSAALRE LIAENRAAVL ARQLINSSED RNWDSSSHNH ATEDLFCDHG QSWSNSVEPQ 360 QHQMFSDHNY QHGWDRFHEG SGAHLTLDLR QAPSPAYGFL PERGKTKAEE DQECDLWNSF 420 HGASVV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27360.4 | 8e-35 | SBP family protein |