PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g277690.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family SBP
Protein Properties Length: 426aa    MW: 46851.6 Da    PI: 8.3111
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g277690.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP1283.6e-40179256178
                       --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
               SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                       +CqvegC++ l +akeyhrrhkvCe+hska++v+v g+eqrfCqqCsrfh +sefDe+krsCrrrLa+hnerrrk+++
  Pd.00g277690.m01 179 RCQVEGCHVPLMNAKEYHRRHKVCEMHSKASKVTVLGQEQRFCQQCSRFHVVSEFDESKRSCRRRLAGHNERRRKSSH 256
                       6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    
MEIGGNMNMN MLGHDHNNNS HISSSSRGQN GNNNTYLTNW DIWGGATSTS AAATNNNSFY  60
SPAAVTVAAT AGASSSATCS EASAGGHAFI MGHPLQQQHS SFYGGGARAH YHPDPHLMCL  120
KLGKRHYFED HARAHAHALD DRHVAGLPVG VMSKRGRGGA AAQHLYGSGA TLALKVVPRC  180
QVEGCHVPLM NAKEYHRRHK VCEMHSKASK VTVLGQEQRF CQQCSRFHVV SEFDESKRSC  240
RRRLAGHNER RRKSSHDSLS RTSSQEKGRF GYLSTPTGRA LSLLSARNTG FDSWVSPSDL  300
SSRSSAALRE LIAENRAAVL ARQLINSSED RNWDSSSHNH ATEDLFCDHG QSWSNSVEPQ  360
QHQMFSDHNY QHGWDRFHEG SGAHLTLDLR QAPSPAYGFL PERGKTKAEE DQECDLWNSF  420
HGASVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27360.48e-35SBP family protein