PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g277680.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family SBP
Protein Properties Length: 336aa    MW: 37411.8 Da    PI: 11.0457
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g277680.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP1322e-41181258178
                       --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
               SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                       +Cq+egC+adls+ak+yhrrhkvCe+hska++v+++gl+qrfCqqCsrfh l efD++krsCrrrLa+hn+rrrk+q+
  Pd.00g277680.m01 181 RCQAEGCTADLSHAKHYHRRHKVCEFHSKASTVIANGLTQRFCQQCSRFHLLPEFDNGKRSCRRRLADHNRRRRKTQQ 258
                       6**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MRKRVRIGRK VAADTTTISS FLSLKRPRRK GRPGKDPRDH YQNAGLRMGK PLHPSAFNNL  60
VPPPPPPQQQ SHHAAFAHHF NSAQAQQLHS IYDAHAYASA SAYAPPNHHP LLSLDPIHGG  120
AAHGLILVPK SEDLCRPVDF ASRIGLNLGG RTYFSSEDDF MNRLYRRTRP ATETGSNHAP  180
RCQAEGCTAD LSHAKHYHRR HKVCEFHSKA STVIANGLTQ RFCQQCSRFH LLPEFDNGKR  240
SCRRRLADHN RRRRKTQQTN QENHNSQVQQ LVENARNSSS DNVARSPPQS AAHSASSVTV  300
ALSPPRMTLD CFRQRPYQAA ATTSSGSSSS LFFSSG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12630RPRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G02065.16e-56SBP family protein