PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g277680.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | SBP | ||||||||
Protein Properties | Length: 336aa MW: 37411.8 Da PI: 11.0457 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 132 | 2e-41 | 181 | 258 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+egC+adls+ak+yhrrhkvCe+hska++v+++gl+qrfCqqCsrfh l efD++krsCrrrLa+hn+rrrk+q+ Pd.00g277680.m01 181 RCQAEGCTADLSHAKHYHRRHKVCEFHSKASTVIANGLTQRFCQQCSRFHLLPEFDNGKRSCRRRLADHNRRRRKTQQ 258 6**************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 336 aa Download sequence |
MRKRVRIGRK VAADTTTISS FLSLKRPRRK GRPGKDPRDH YQNAGLRMGK PLHPSAFNNL 60 VPPPPPPQQQ SHHAAFAHHF NSAQAQQLHS IYDAHAYASA SAYAPPNHHP LLSLDPIHGG 120 AAHGLILVPK SEDLCRPVDF ASRIGLNLGG RTYFSSEDDF MNRLYRRTRP ATETGSNHAP 180 RCQAEGCTAD LSHAKHYHRR HKVCEFHSKA STVIANGLTQ RFCQQCSRFH LLPEFDNGKR 240 SCRRRLADHN RRRRKTQQTN QENHNSQVQQ LVENARNSSS DNVARSPPQS AAHSASSVTV 300 ALSPPRMTLD CFRQRPYQAA ATTSSGSSSS LFFSSG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 26 | 30 | RPRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G02065.1 | 6e-56 | SBP family protein |