PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g277540.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 175aa    MW: 20242.3 Da    PI: 8.2841
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g277540.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.89.5e-33101159159
                       ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                       ldDgy+WrKYGqK+vk+s +prsYYrCt+++C+vkk+ver +ed ++v++tYeg+Hnh+
  Pd.00g277540.m01 101 LDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHT 159
                       59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MEGDQRGVPS YEVQISFSST PNPQQSIHEM GFVQPSWNNS NDQVGTLDPK AISDENGTGN  60
ASDCSNSWWR SSSSEKSKMK VRRKLREPRF CFQTRSDVDV LDDGYKWRKY GQKVVKNSLH  120
PRSYYRCTHS NCRVKKRVER LSEDCRMVIT TYEGRHNHTP CDDSNSSEHE CFSSF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18086KVRRKLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44745.19e-60WRKY family protein