PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g277170.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 196aa MW: 22048.7 Da PI: 5.3142

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g277170.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29	2.4e-09	8	54	3	47
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 +WT Ed+l+ +a ++ + +W++Ia++++ g+t++++ +++ ++ Pd.00g277170.m01 8 PWTRFEDKLFEQALVRFSEDlpdRWERIAEEVP-GKTPEEVLEHYETL 54 7***************99*********.********9875 PP
2	Myb_DNA-binding	25.8	2.4e-08	91	125	13	47
HHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 13 vdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 + + k++G+g+W++I+r + +Rt+ q+ s+ qky Pd.00g277170.m01 91 LIGLKKFGKGDWRSISRNVVVTRTPTQVASHAQKY 125 55789*****************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 196 aa Download sequence
MAQSASAPWT RFEDKLFEQA LVRFSEDLPD RWERIAEEVP GKTPEEVLEH YETLVHDVLE 60 IDSGRVELPS YADDSVVGWD TASQISFGLF LIGLKKFGKG DWRSISRNVV VTRTPTQVAS 120 HAQKYFLRQS SVKKERKRSS IHDITTVESN SVAVPADRNW IPPPGVPAQQ PPLQQPQGHL 180 PDQGGSMGYQ DFGYPM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	2e-64	MYB family protein