PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g272890.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 655aa MW: 70632.1 Da PI: 5.8114 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 50.8 | 2.9e-16 | 461 | 507 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K++Ka++L +A+eY+k Lq Pd.00g272890.m01 461 VHNLSERRRRDRINEKMRALQELIPNC-----NKVDKASMLDEAIEYLKTLQ 507 6*************************8.....6******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 655 aa Download sequence |
MPLSELYRMA GRVDSSPDFE PVNDFVELVW ENGQIMMQGQ SSRTRKSPNC NNSLPSYTPK 60 NRDKDVGNGN IAKTGKFGSV ESVLDEIPLS VPSSEMGLSE DDEMLPWLNY SIDEPLHHEY 120 CHEFLPELST VTANEISSNS NLASMDKRSS SSQVYRDSNT NSAHEGAYLE QRNAPKVTSI 180 DGADVSRPRT GTSQLYPLSS QQSQSLFPSF RSRVSDIVGD NTGSATHPTV CKNSTQVSSA 240 GVFPDIKMQR QDPVMPSNNN SSVVNFSHFS RPAALVKSNL QSIGVVAGSG LSSMERIGNK 300 GKVSAATSNN PVESTLIDSS SGLPKESNSK CQHTTVTSNV ELKPTEAKPL EESCAAKQSE 360 VACQEDASKN DTNTNHIPCE SANRVLRDGE KTLEPVVASS VCSGNSVERA SDDPTHALKR 420 KSRDTDESEC HSDDVEEESV GVKKITHARG MGSKRSRAAE VHNLSERRRR DRINEKMRAL 480 QELIPNCNKV DKASMLDEAI EYLKTLQLQV QIMSMGAGHT AFNGMVGSNL QMFGLPGQGV 540 PMPMQRPPFV PSSGGPFMKS SVGLNACGAG GPMENAESAP VSGSKDSVQN MNSQVVQNTN 600 ANSSMNQTSS QCQATNEGFG QPALVRNNVQ AVDVDNKRAN RSSNGNDVVL SRTAS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 466 | 471 | ERRRRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09530.2 | 1e-49 | bHLH family protein |