PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g272890.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 655aa    MW: 70632.1 Da    PI: 5.8114
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g272890.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH50.82.9e-16461507455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        hn  ErrRRdriN+++  L+el+P++      K++Ka++L +A+eY+k Lq
  Pd.00g272890.m01 461 VHNLSERRRRDRINEKMRALQELIPNC-----NKVDKASMLDEAIEYLKTLQ 507
                       6*************************8.....6******************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 655 aa     Download sequence    
MPLSELYRMA GRVDSSPDFE PVNDFVELVW ENGQIMMQGQ SSRTRKSPNC NNSLPSYTPK  60
NRDKDVGNGN IAKTGKFGSV ESVLDEIPLS VPSSEMGLSE DDEMLPWLNY SIDEPLHHEY  120
CHEFLPELST VTANEISSNS NLASMDKRSS SSQVYRDSNT NSAHEGAYLE QRNAPKVTSI  180
DGADVSRPRT GTSQLYPLSS QQSQSLFPSF RSRVSDIVGD NTGSATHPTV CKNSTQVSSA  240
GVFPDIKMQR QDPVMPSNNN SSVVNFSHFS RPAALVKSNL QSIGVVAGSG LSSMERIGNK  300
GKVSAATSNN PVESTLIDSS SGLPKESNSK CQHTTVTSNV ELKPTEAKPL EESCAAKQSE  360
VACQEDASKN DTNTNHIPCE SANRVLRDGE KTLEPVVASS VCSGNSVERA SDDPTHALKR  420
KSRDTDESEC HSDDVEEESV GVKKITHARG MGSKRSRAAE VHNLSERRRR DRINEKMRAL  480
QELIPNCNKV DKASMLDEAI EYLKTLQLQV QIMSMGAGHT AFNGMVGSNL QMFGLPGQGV  540
PMPMQRPPFV PSSGGPFMKS SVGLNACGAG GPMENAESAP VSGSKDSVQN MNSQVVQNTN  600
ANSSMNQTSS QCQATNEGFG QPALVRNNVQ AVDVDNKRAN RSSNGNDVVL SRTAS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1466471ERRRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09530.21e-49bHLH family protein