PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g269620.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 330aa    MW: 36991.8 Da    PI: 8.4083
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g269620.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.62.8e-181663148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT+ Ed++l+  v+++G g+W + +++ g+ R++k+c++rw++yl
  Pd.00g269620.m01 16 KGPWTPAEDQKLLAFVQKHGHGNWQSLPQKAGLQRCGKSCRLRWRNYL 63
                      79*********************************************7 PP
2Myb_DNA-binding51.22.9e-1669112146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg+++ +Ed+ +++++++lG++ W++Ia++++ +Rt++++k++w++
  Pd.00g269620.m01  69 RGNFSLQEDQTIIQLHALLGNR-WSAIAAHLP-KRTDNEVKNYWHS 112
                       89********************.*********.***********86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MGNSTHDCVA SSGVKKGPWT PAEDQKLLAF VQKHGHGNWQ SLPQKAGLQR CGKSCRLRWR  60
NYLRPDIKRG NFSLQEDQTI IQLHALLGNR WSAIAAHLPK RTDNEVKNYW HSRLKKLLAL  120
KGYDPVTHKP KTTIFGFANG STDDPKTGSN LNHIAQWESA RLQAEARFVR DLELHKQAYH  180
PHNNNDIFAT SSILLGHNKD FGPTDQLFGQ NAPQCLDMLR AWEIILLPNY SKATGGQDHV  240
NSFGNRLASD FEPPIISAIS NNGSSLMDCF VHEPVGQCFD ENYGTSITEP FATIHHNMGF  300
KNNGACLEDF GLWEIIMQGK KYCPISGISM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01140.11e-82MYB family protein