PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g268520.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 418aa MW: 48076.8 Da PI: 9.1061

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g268520.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	70.2	5e-22	77	162	1	88
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 kfYn+YA+ vGFs+r+sk +k+ + g+ +r fvCs egkre++k + + +++raetr gC a++k++ + ++k++vt+++ eH+H Pd.00g268520.m01 77 KFYNAYAYGVGFSIRRSKFHKE-KCGKLRDRLFVCSAEGKREKNKCD-GSVKSHRAETRFGCLARMKISCRLNDKYCVTEFVPEHTHV 162 6***************9998.6677**************99.9999*********************************5 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MNGENNYKDD DGTQASLKLI FETGVDFNAF AGSESNEEKF SETTQGNENI ELIHSNMQKK 60 LVPVIGMEFE TEEEAFKFYN AYAYGVGFSI RRSKFHKEKC GKLRDRLFVC SAEGKREKNK 120 CDGSVKSHRA ETRFGCLARM KISCRLNDKY CVTEFVPEHT HVTSSPCKTH FFRSHRNMSL 180 AQIVEADMAD SSGIAPKETL ELLSRQAGGR QNLGFIPVDY KNYLRSKRTR EMRRLVEDRR 240 YQELKAEFRA SQSSPALSFP VEILKHASNI YTPEVFKLFQ DELCKAHDCV LKFNGEIGSI 300 SKYEVIPHKK YWHHTVTFDS IDNTVLCSCK KYEFAGILCA HALKVLSTRN IKSIPAQYIL 360 KRWTKNIKAK STKSTCNVSS ENDSKVEIVR RYRELCRLHT QLATRASESR HMIWTSEL

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MNGENNYKDD DGTQASLKLI FETGVDFNAF AGSESNEEKF SETTQGNENI ELIHSNMQKK  60
LVPVIGMEFE TEEEAFKFYN AYAYGVGFSI RRSKFHKEKC GKLRDRLFVC SAEGKREKNK  120
CDGSVKSHRA ETRFGCLARM KISCRLNDKY CVTEFVPEHT HVTSSPCKTH FFRSHRNMSL  180
AQIVEADMAD SSGIAPKETL ELLSRQAGGR QNLGFIPVDY KNYLRSKRTR EMRRLVEDRR  240
YQELKAEFRA SQSSPALSFP VEILKHASNI YTPEVFKLFQ DELCKAHDCV LKFNGEIGSI  300
SKYEVIPHKK YWHHTVTFDS IDNTVLCSCK KYEFAGILCA HALKVLSTRN IKSIPAQYIL  360
KRWTKNIKAK STKSTCNVSS ENDSKVEIVR RYRELCRLHT QLATRASESR HMIWTSEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-26	FAR1 family protein