PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g268130.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 271aa MW: 30275.2 Da PI: 7.7466 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64 | 3.2e-20 | 131 | 180 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+W+AeIrdp+ r +r++lg+f taeeAa+a+++a+ +++g Pd.00g268130.m01 131 NYRGVRQRP-WGKWAAEIRDPR----RaTRVWLGTFMTAEEAARAYDKAAIEFRG 180 59*******.**********82....48************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 271 aa Download sequence |
MRSSYKRPKL NDPEPIHPAE PPMQLQPRRL TQDQELTVIV SALRNVVAGT TTAASMDFNS 60 LLPPLQCAST SYAGATGSSC YSDALLTQSD LDTCNVCKIQ GCLGCNFFPP PAQEEKGNNI 120 KKGPKKRVKK NYRGVRQRPW GKWAAEIRDP RRATRVWLGT FMTAEEAARA YDKAAIEFRG 180 ARAKLNFPFP DTTLLTQETN SAQPAQPQQV VTEQVTSSEF SREIEMAEIG KGKEKEKEFW 240 EMIGEDEIQQ WMRMMDFATD NSSDSGNAQS A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34410.1 | 1e-36 | ERF family protein |