PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g267840.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 292aa    MW: 31563.9 Da    PI: 8.128
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g267840.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.22.9e-1390133855
                       HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        Er RR+++++ f++L  llP++     +K +K++i+ +Av+YIk Lq
  Pd.00g267840.m01  90 KERERRKKMRNMFANLHALLPQL----PPKADKSTIVDEAVNYIKTLQ 133
                       6*********************6....39******************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MSGGETVGFS EGFLWENQSW ANLSINSDNS VGAGDEDKNL GNKEETAVMG ISTEGQNQVP  60
PAPGKKRRGG GGVGKNGIIK GSTSPADKGK ERERRKKMRN MFANLHALLP QLPPKADKST  120
IVDEAVNYIK TLQQTLQKLQ KQKLERLQGA TTINFDPSIL TPQNVAFGSR EEFLANHGSA  180
ATINPSNSLL TSHCGPANFQ TWTTPNVVLN ICGDEAQISV CCPKKPGLLS AICFVLEKYK  240
LGVMSAHVSS DCNRSMYMIQ AHARGAPDQF LETFPADEIF KQAAAEIILM LS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.11e-31bHLH family protein