PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g266150.m02 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 597aa MW: 66147.4 Da PI: 9.507 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.4 | 2.1e-15 | 90 | 134 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT eE+ ++++a k++G W +I +++g ++t+ q++s+ qk+ Pd.00g266150.m02 90 RERWTHEEHNKFLEALKLYGRA-WQRIEEHIG-TKTAVQIRSHAQKF 134 78******************88.*********.************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 597 aa Download sequence |
MAGLRLRWFP QPNSMPLYTL SVEFVRLPSI FEPFPSTNEN YAFSGECPAS YWSLSHNPSS 60 SRKLSIRHGF LRREYLAIKA RKPYTITKQR ERWTHEEHNK FLEALKLYGR AWQRIEEHIG 120 TKTAVQIRSH AQKFFSKLEK EAHVNGVPIG QSIGIDIPPP RPKRKPCNPY PRKSSSAAST 180 CATLHVGAKV GKLLSSASSS CYKQVVDLEK EPLHERPFGE EKANNAENQV ANWAEVFTLL 240 QDGHCSSVSS ANNNSIPSQV ALGNACTLTD ATNESYVTIK LKGNQNLKKI DAKMIVGDNG 300 TSGAPKSGNI NNAFHKELVQ VPSMDTGQAP PANREKGESS LQIPSLQDQQ LDSRHTEAVE 360 AQHSNIAKAN TDDEKEVAST EEVHDSNHAK SRKQVDRSSY GSNTPSDSED ETAAIEKNEK 420 GKEELKEPNT SHPAAESSQR RSRCVSNMYD SWKEVSEEGR LAFHALFSRD VLPQSFSLTQ 480 DLKIKGHQND ATHLLGPKLK AVSLLSFPSL RQQLLSQRHA PKSTKVLPSL RQQAYGSSQH 540 LLAERHPMGN TFLAPLLKAM PNGTFQAYGS KLTAAPEAPA LALPNGTPWV TLLQRLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01060.3 | 1e-46 | MYB_related family protein |