PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g266150.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 571aa MW: 63318.1 Da PI: 9.7025

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g266150.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.5	2e-15	90	134	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT eE+ ++++a k++G W +I +++g ++t+ q++s+ qk+ Pd.00g266150.m01 90 RERWTHEEHNKFLEALKLYGRA-WQRIEEHIG-TKTAVQIRSHAQKF 134 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 571 aa Download sequence
MAGLRLRWFP QPNSMPLYTL SVEFVRLPSI FEPFPSTNEN YAFSGECPAS YWSLSHNPSS 60 SRKLSIRHGF LRREYLAIKA RKPYTITKQR ERWTHEEHNK FLEALKLYGR AWQRIEEHIG 120 TKTAVQIRSH AQKFFSKLEK EAHVNGVPIG QSIGIDIPPP RPKRKPCNPY PRKSSSAAST 180 CATLHVGAKR PFGEEKANNA ENQVANWAEV FTLLQDGHCS SVSSANNNSI PSQVALGNAC 240 TLTDATNESY VTIKLKGNQN LKKIDAKMIV GDNGTSGAPK SGNINNAFHK ELVQVPSMDT 300 GQAPPANREK GESSLQIPSL QDQQLDSRHT EAVEAQHSNI AKANTDDEKE VASTEEVHDS 360 NHAKSRKQVD RSSYGSNTPS DSEDETAAIE KNEKGKEELK EPNTSHPAAE SSQRRSRCVS 420 NMYDSWKEVS EEGRLAFHAL FSRDVLPQSF SLTQDLKIKG HQNDATHLLG PKLKAVSLLS 480 FPSLRQQLLS QRHAPKSTKV LPSLRQQAYG SSQHLLAERH PMGNTFLAPL LKAMPNGTFQ 540 AYGSKLTAAP EAPALALPNG TPWVTLLQRL F

Sequence ? help Back to Top

Protein Sequence Length: 571 aa Download sequence

MAGLRLRWFP QPNSMPLYTL SVEFVRLPSI FEPFPSTNEN YAFSGECPAS YWSLSHNPSS  60
SRKLSIRHGF LRREYLAIKA RKPYTITKQR ERWTHEEHNK FLEALKLYGR AWQRIEEHIG  120
TKTAVQIRSH AQKFFSKLEK EAHVNGVPIG QSIGIDIPPP RPKRKPCNPY PRKSSSAAST  180
CATLHVGAKR PFGEEKANNA ENQVANWAEV FTLLQDGHCS SVSSANNNSI PSQVALGNAC  240
TLTDATNESY VTIKLKGNQN LKKIDAKMIV GDNGTSGAPK SGNINNAFHK ELVQVPSMDT  300
GQAPPANREK GESSLQIPSL QDQQLDSRHT EAVEAQHSNI AKANTDDEKE VASTEEVHDS  360
NHAKSRKQVD RSSYGSNTPS DSEDETAAIE KNEKGKEELK EPNTSHPAAE SSQRRSRCVS  420
NMYDSWKEVS EEGRLAFHAL FSRDVLPQSF SLTQDLKIKG HQNDATHLLG PKLKAVSLLS  480
FPSLRQQLLS QRHAPKSTKV LPSLRQQAYG SSQHLLAERH PMGNTFLAPL LKAMPNGTFQ  540
AYGSKLTAAP EAPALALPNG TPWVTLLQRL F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01060.3	8e-41	MYB_related family protein