PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g265700.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 302aa MW: 32935.7 Da PI: 7.0199

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g265700.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	62.5	8.8e-20	22	67	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W+++Ede+l ++v+ +G ++W++I++ ++ gR++k+c++rw + Pd.00g265700.m01 22 KGPWSPDEDEKLRQLVQHHGARNWSLISKSVP-GRSGKSCRLRWCNQ 67 79****************************.*********985 PP
2	Myb_DNA-binding	56.3	7.3e-18	76	118	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEde+++ a++++G++ W+tIar ++ gRt++ +k++w++ Pd.00g265700.m01 76 AFTPEEDEIIAGAHAKYGNK-WATIARLLN-GRTDNAIKNHWNST 118 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence
MDQRESAMDS SAQAQRELDR VKGPWSPDED EKLRQLVQHH GARNWSLISK SVPGRSGKSC 60 RLRWCNQLSP EVEHRAFTPE EDEIIAGAHA KYGNKWATIA RLLNGRTDNA IKNHWNSTLK 120 RKFSAISGND DGATIDDNHV RPEKKTAMVA VSFSGLCYSP GSPSGSDVSD SGAPAMSSSH 180 VFRPVARTSG VLIRESPPSQ NNSKNEAPEP STLLTLSLPG VDDAPSHELP ILESAARRVE 240 GTASLQPETS NAGNTMSFGT EFLSVMQEMI RTEVRSYMEG MSLHSEGVRN AGVKRIAISK 300 LD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23290.1	6e-74	MYB family protein