PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g264880.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 362aa    MW: 39659.8 Da    PI: 4.8356
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g264880.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.24e-102863261055
                       HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       r+RR++iN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  Pd.00g264880.m01 286 RKRREKINERLRVLQNLVPNG-----TKVDISTMLEEAVHYVKFLQ 326
                       9******************97.....8******************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    
MEHIGVVAEG EWTSLSGMYT AEEVDFMAQL LGNFSSSNHP SGTSSMRVPD AFWPGDESLT  60
MNMSGNHEGS HYSSETSISD CSNRILFPTS SNESYYLSSD SHPMLVTSNS SMSIDFGSGD  120
GIRNLNSYLI EINDQCLNQE PSEGNAEEYG GNQPEAVALG KRKYDMTVQE PAMDDKSNPS  180
KNSMKGTQIS ENMNKRNIKS KKSLQIITSN NEEDGNAGPN RQSSSSCCSG DDSNIALHSH  240
ENSQELSPGS TSTSSLSPKE ASALNLSGKS RARRGSAIDP QSLYARKRRE KINERLRVLQ  300
NLVPNGTKVD ISTMLEEAVH YVKFLQLQIK LLSSDDMWMY APICYNGMDL GLDLKLTSPK  360
QS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1286291RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33880.12e-58bHLH family protein