PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g264420.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 265aa    MW: 28674.3 Da    PI: 8.3151
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g264420.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.86.2e-1176122354
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       ++h+e+ErrRR+riN  +++Lr l+P       +K++Ka+ L  ++  +k+L
  Pd.00g264420.m01  76 KNHSEAERRRRERINAHLSTLRGLVPCT-----EKMDKAALLATVISQVKEL 122
                       58*************************8.....7********9999888777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MAFYSFNSNS SFRSEYSSLY DPFTHGSSGF GGALRGGGSV LPHSLVLDSE KGELVKAPAR  60
VGKKGVSEAK ALAALKNHSE AERRRRERIN AHLSTLRGLV PCTEKMDKAA LLATVISQVK  120
ELKKDALESS KGFLIPVDAD EVQVEPYDTG AGDGTISVRA SVCCEYRSEL LSDLREALDS  180
LHLQMVKADI ATLGNRVKNV FVFTSCKERS NDADADAFQL LASSVHQALS SVLDKASASP  240
EYSPRTTLLS KRRRVSYFDT SSSSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18287ERRRRE
2251255KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41130.11e-34bHLH family protein