PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g264190.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 417aa MW: 48367.9 Da PI: 8.4713

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g264190.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.9	1.7e-31	88	141	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+a+e+LGG+++AtPk +l+lm+vkgL+++hvkSHLQ+YR+ Pd.00g264190.m01 88 PRLRWTPQLHLSFVHAIERLGGQDRATPKLVLQLMNVKGLSISHVKSHLQMYRS 141 8****************************************************7 PP
2	Myb_DNA-binding	47.7	3.5e-15	89	140	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +v+a+++lGg t+k++ + m+ kg++ ++ks++q+y+ Pd.00g264190.m01 89 RLRWTPQLHLSFVHAIERLGGQdraTPKLVLQLMNvKGLSISHVKSHLQMYR 140 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MTNEKDYGDQ EENTSEGSSQ LKCSSFDLNE EAGSDNCDDT KVEEFELSVD EDDEKRGQGN 60 INSSTATSAE GNEGRRGKVR QYVRSKMPRL RWTPQLHLSF VHAIERLGGQ DRATPKLVLQ 120 LMNVKGLSIS HVKSHLQMYR SKKLDGDGQV VSEKQESTHR RDHIACMLHQ KIKQPRQHVY 180 FRTDNGGIVV ATPSHDDRQP LHSDFKPNVP RSSFSLLNKE VVQGNKSMEM TVRSTTVPIN 240 PSQFLEEKKW PPFGMINKQQ CWRAKRFPAK INWSHNYNGS QSDHLVHHMR TTPRLNNGQF 300 FHNTRSTEWN LGENKNTRRF PSNSHNSISN SSCHKTEFEP PFRLELNEEK ILKYKEWMPE 360 LELGLSQRLE NHEKTVFQHQ MVSEEAYETA QRIKQNYYKE LEDRSKQEIS TKLSLSL

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MTNEKDYGDQ EENTSEGSSQ LKCSSFDLNE EAGSDNCDDT KVEEFELSVD EDDEKRGQGN  60
INSSTATSAE GNEGRRGKVR QYVRSKMPRL RWTPQLHLSF VHAIERLGGQ DRATPKLVLQ  120
LMNVKGLSIS HVKSHLQMYR SKKLDGDGQV VSEKQESTHR RDHIACMLHQ KIKQPRQHVY  180
FRTDNGGIVV ATPSHDDRQP LHSDFKPNVP RSSFSLLNKE VVQGNKSMEM TVRSTTVPIN  240
PSQFLEEKKW PPFGMINKQQ CWRAKRFPAK INWSHNYNGS QSDHLVHHMR TTPRLNNGQF  300
FHNTRSTEWN LGENKNTRRF PSNSHNSISN SSCHKTEFEP PFRLELNEEK ILKYKEWMPE  360
LELGLSQRLE NHEKTVFQHQ MVSEEAYETA QRIKQNYYKE LEDRSKQEIS TKLSLSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	7e-36	G2-like family protein