PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g262950.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 873aa MW: 99502.8 Da PI: 7.7343

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g262950.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.9	4.1e-33	182	239	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s++prsYYrCt+++C vkk+vers edp++v++tYeg+Hnh+ Pd.00g262950.m01 182 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCGVKKRVERSFEDPSTVITTYEGQHNHP 239 8********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 873 aa Download sequence
MSDHEHKDLY YHDLFQYEDH EHLNGGMISI NHNQNLQGIE VPSYMNNTSF AECLKGPMDY 60 NTLATAFGLA SSTSDEVIFS SANEGDQKPA EHIRYSGGGG DGDGGGGETP LTPNSSVSSS 120 SAEAGAEEDS GKSKKDRQPK GSSEDGGDSS KKVMSKAKKK GEKKLREPRF AFMTKSEVDH 180 LEDGYRWRKY GQKAVKNSPY PRSYYRCTTQ KCGVKKRVER SFEDPSTVIT TYEGQHNHPL 240 PATLRGNGAA SSAFFPHAAA AFNYAPITGS GAMCSLLSLV KHAPSLVKSA TNHADDLYKD 300 RAVEDLPYRR SFYGLSALIG LCGLLCRSYV PCHNIIDRSN MFGADLMDRE MVDAGPVTPG 360 QVSFLLGIIP VFVTWIYSEY LEYKKSSSHP KVHSDTNLVE LGEETIKEDD RAVLLEGGLS 420 RSASTKFNSS SIKINLIRFL TMDDSFLLEN RATLRVMSEL GAILFYFYIC DRTNILGAST 480 KNYNRDLFLF LYLLLIIVSA VTSLKKHTDR SAFSGKSILY LNRHQTEEWK GWMQVLFLMY 540 HYFAASEIYN AIRVFIAAYV WMTGFGNFSY YYIRKDFSLA RFAQMMWRLN FFVAFCCIVL 600 NNDYMLYYIC PMHTLYTLMV YGALGIFSKY NEIRSAMAVK ILGCFLAVIL IWEIPGVFEI 660 FFRPLSLLGY TDPAKPDLPR LHEWHFRSGL DRYIWIIGMI YAYYHPNVEK WMDKLEESDT 720 KRRVSIKAGI FSSSVFVGYL WYEYIYKLDK VSYNKLHPYT SWIPITVYIC LRNFTQQLRG 780 VSLTLFAWLG KITLETYISQ FHIWLRSNTP NGQPKWLLSL IPEYPLLNFM LTTAIYVLVS 840 HRLFELTNTL KTVYLIDQLN EEDPKEGYTD VSC

Sequence ? help Back to Top

Protein Sequence Length: 873 aa Download sequence

MSDHEHKDLY YHDLFQYEDH EHLNGGMISI NHNQNLQGIE VPSYMNNTSF AECLKGPMDY  60
NTLATAFGLA SSTSDEVIFS SANEGDQKPA EHIRYSGGGG DGDGGGGETP LTPNSSVSSS  120
SAEAGAEEDS GKSKKDRQPK GSSEDGGDSS KKVMSKAKKK GEKKLREPRF AFMTKSEVDH  180
LEDGYRWRKY GQKAVKNSPY PRSYYRCTTQ KCGVKKRVER SFEDPSTVIT TYEGQHNHPL  240
PATLRGNGAA SSAFFPHAAA AFNYAPITGS GAMCSLLSLV KHAPSLVKSA TNHADDLYKD  300
RAVEDLPYRR SFYGLSALIG LCGLLCRSYV PCHNIIDRSN MFGADLMDRE MVDAGPVTPG  360
QVSFLLGIIP VFVTWIYSEY LEYKKSSSHP KVHSDTNLVE LGEETIKEDD RAVLLEGGLS  420
RSASTKFNSS SIKINLIRFL TMDDSFLLEN RATLRVMSEL GAILFYFYIC DRTNILGAST  480
KNYNRDLFLF LYLLLIIVSA VTSLKKHTDR SAFSGKSILY LNRHQTEEWK GWMQVLFLMY  540
HYFAASEIYN AIRVFIAAYV WMTGFGNFSY YYIRKDFSLA RFAQMMWRLN FFVAFCCIVL  600
NNDYMLYYIC PMHTLYTLMV YGALGIFSKY NEIRSAMAVK ILGCFLAVIL IWEIPGVFEI  660
FFRPLSLLGY TDPAKPDLPR LHEWHFRSGL DRYIWIIGMI YAYYHPNVEK WMDKLEESDT  720
KRRVSIKAGI FSSSVFVGYL WYEYIYKLDK VSYNKLHPYT SWIPITVYIC LRNFTQQLRG  780
VSLTLFAWLG KITLETYISQ FHIWLRSNTP NGQPKWLLSL IPEYPLLNFM LTTAIYVLVS  840
HRLFELTNTL KTVYLIDQLN EEDPKEGYTD VSC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18170.1	1e-46	WRKY family protein