PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g262810.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 295aa MW: 33002.3 Da PI: 6.3115 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 11.5 | 0.00057 | 245 | 281 | 13 | 54 |
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 R+++++ Lr ++P + ++ +++L +Av+Y+ksL Pd.00g262810.m01 245 RQKMKKMVRVLRGIVPGgN------EMNTVDVLDEAVQYLKSL 281 7889999999999999855......8***************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 295 aa Download sequence |
MNIGVTFKRY RAIKEVGKII MSVGVIAYYQ LMQVCQAEYF RQLLKPVTQL SCTRMRDQQF 60 DPNKAAPPFA NQVGNNYMHI PVASAHGAVL PHEAKHIKPF HGVEFQTSDI CPKNFIIFDQ 120 TDHRSQIMFN PAIAHKITGP AFNICAAYIQ DNLGLNEGNN EDRETSSSLK EDSDDIDALL 180 SLEEEELEEY DEEEVSTART HGNYGSMSPD SCSNYGLKTK KNRQCSSLGK SSGIGSSSCN 240 SERKRQKMKK MVRVLRGIVP GGNEMNTVDV LDEAVQYLKS LKVELQNLGV ENLND |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29950.1 | 4e-33 | bHLH family protein |