PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g260480.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 146aa MW: 16780.3 Da PI: 9.5844 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.4 | 2.6e-16 | 10 | 57 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll+++ + +G g W+ ++ + g++R++k+c++rw++yl Pd.00g260480.m01 10 KGAWTKEEDGLLIKCMENHGEGKWHEVPYKAGLNRCRKSCRLRWLNYL 57 79********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 146 aa Download sequence |
MEGNNLDVKK GAWTKEEDGL LIKCMENHGE GKWHEVPYKA GLNRCRKSCR LRWLNYLKPN 60 IKRGQFTEDE VDLIIRLHKL LGNRSVLFGR LLHSSRHFVS FTPLDTSSPV RVHTLPRLSK 120 GKSILYGNSE SEPVSEACAQ LTQEFF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66370.1 | 4e-39 | MYB family protein |